Tally 2.0


Tally-2.0 is a scoring tool based on a machine learning approach, which allows to validate the results of tandem repeat detection in protein sequences. As an input, Tally-2.0 uses tandem repeat region presented as a MSA of the repeats. An output lists Tally-2.0 and several other scores (Psim, entropy, p-value-phylo and parsimony) allowing the users to validate the quality of the examined tandem repeats.

For more details see:
Tally-2.0: upgraded validator of tandem repeat detection in protein sequences V. Perovic, J. Leclercq, N. Sumonja, F. Richard, N. Veljkovic and A. V. Kajava doi:10.1093/bioinformatics/btaa121

For details on our previous version see:
Tally: a scoring tool for boundary determination between repetitive and non-repetitive protein sequences
F. D. Richard, R. Alves and A. V. Kajava - Bioinformatics 2016, 1–7 doi:10.1093/bioinformatics/btw118

Documentation

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